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IMPC Data Release 19.0 Notes

IMPC

  • Release: 19.0
  • Published: 9th May 2023

Statistical Package

Genome Assembly

Summary

  • Number of phenotyped genes: 8,481
  • Number of phenotyped mutant lines: 9,138
  • Number of phenotype calls: 102,805

Data access

  • Ftp interface: ftp
  • RESTful interfaces: APIs

Highlights

Data release 19.0

Release notes:

Represents a major data release.
This release

  • Includes approximately 2.1 million more data points.

Data Reports

Total Number of Lines and Specimens in DR 19.0

Phenotyping Center Mutant Lines Baseline Mice Mutant Mice
TCP 719 9,039 29,910
JAX 1,932 15,307 56,559
HMGU 504 6,516 9,773
CCP-IMG 293 3,097 5,438
MRC Harwell 845 7,522 20,679
MARC 233 1,858 3,588
KMPC 79 2,353 2,822
RBRC 113 2,163 2,588
ICS 239 2,619 3,882
WTSI 1,612 5,364 18,660
UC Davis 1,511 9,211 38,526
BCM 1,059 8,795 32,204

Experimental Data and Quality Checks

Data Type QC Passed Data Points
categorical 24,969,697
image record 756,662
time series 26,134,856
ontological 1,857,303
text 558,603
unidimensional 21,538,759

* Excluded from statistical analysis.

Distribution of Phenotype Annotations

Production Status

Overall

By Center

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More charts and status information are available from our mouse tracking service GenTaR.

Phenotype Associations

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Trends

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Previous Releases

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